MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]
Identifieur interne : 006F28 ( Main/Exploration ); précédent : 006F27; suivant : 006F29MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]
Auteurs : Hiren J. Joshi ; Matthias Hirsch-Hoffmann ; Katja Baerenfaller ; Wilhelm Gruissem ; Sacha Baginsky ; Robert Schmidt ; Waltraud X. Schulze ; Qi Sun ; Klaas J. Van Wijk ; Volker Egelhofer ; Stefanie Wienkoop ; Wolfram Weckwerth ; Christophe Bruley ; Norbert Rolland ; Tetsuro Toyoda ; Hirofumi Nakagami ; Alexandra M. Jones ; Steven P. Briggs ; Ian Castleden ; Sandra K. Tanz ; A. Harvey Millar ; Joshua L. HeazlewoodSource :
- Plant Physiology [ 0032-0889 ] ; 2010.
Abstract
Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed to the ever-expanding array of data in modern biology, with many generating Web portals and online resources that contain incrementally expanding and updated information. Many of these resources reflect specialist research areas with significant and novel information that is not currently captured by centralized repositories. The Arabidopsis (
Url:
DOI: 10.1104/pp.110.168195
PubMed: 21075962
PubMed Central: 3075751
Affiliations:
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Joshi</name></author><author><name sortKey="Hirsch Hoffmann, Matthias" sort="Hirsch Hoffmann, Matthias" uniqKey="Hirsch Hoffmann M" first="Matthias" last="Hirsch-Hoffmann">Matthias Hirsch-Hoffmann</name></author><author><name sortKey="Baerenfaller, Katja" sort="Baerenfaller, Katja" uniqKey="Baerenfaller K" first="Katja" last="Baerenfaller">Katja Baerenfaller</name></author><author><name sortKey="Gruissem, Wilhelm" sort="Gruissem, Wilhelm" uniqKey="Gruissem W" first="Wilhelm" last="Gruissem">Wilhelm Gruissem</name></author><author><name sortKey="Baginsky, Sacha" sort="Baginsky, Sacha" uniqKey="Baginsky S" first="Sacha" last="Baginsky">Sacha Baginsky</name></author><author><name sortKey="Schmidt, Robert" sort="Schmidt, Robert" uniqKey="Schmidt R" first="Robert" last="Schmidt">Robert Schmidt</name></author><author><name sortKey="Schulze, Waltraud X" sort="Schulze, Waltraud X" uniqKey="Schulze W" first="Waltraud X." last="Schulze">Waltraud X. Schulze</name></author><author><name sortKey="Sun, Qi" sort="Sun, Qi" uniqKey="Sun Q" first="Qi" last="Sun">Qi Sun</name></author><author><name sortKey="Van Wijk, Klaas J" sort="Van Wijk, Klaas J" uniqKey="Van Wijk K" first="Klaas J." last="Van Wijk">Klaas J. Van Wijk</name></author><author><name sortKey="Egelhofer, Volker" sort="Egelhofer, Volker" uniqKey="Egelhofer V" first="Volker" last="Egelhofer">Volker Egelhofer</name></author><author><name sortKey="Wienkoop, Stefanie" sort="Wienkoop, Stefanie" uniqKey="Wienkoop S" first="Stefanie" last="Wienkoop">Stefanie Wienkoop</name></author><author><name sortKey="Weckwerth, Wolfram" sort="Weckwerth, Wolfram" uniqKey="Weckwerth W" first="Wolfram" last="Weckwerth">Wolfram Weckwerth</name></author><author><name sortKey="Bruley, Christophe" sort="Bruley, Christophe" uniqKey="Bruley C" first="Christophe" last="Bruley">Christophe Bruley</name></author><author><name sortKey="Rolland, Norbert" sort="Rolland, Norbert" uniqKey="Rolland N" first="Norbert" last="Rolland">Norbert Rolland</name></author><author><name sortKey="Toyoda, Tetsuro" sort="Toyoda, Tetsuro" uniqKey="Toyoda T" first="Tetsuro" last="Toyoda">Tetsuro Toyoda</name></author><author><name sortKey="Nakagami, Hirofumi" sort="Nakagami, Hirofumi" uniqKey="Nakagami H" first="Hirofumi" last="Nakagami">Hirofumi Nakagami</name></author><author><name sortKey="Jones, Alexandra M" sort="Jones, Alexandra M" uniqKey="Jones A" first="Alexandra M." last="Jones">Alexandra M. Jones</name></author><author><name sortKey="Briggs, Steven P" sort="Briggs, Steven P" uniqKey="Briggs S" first="Steven P." last="Briggs">Steven P. Briggs</name></author><author><name sortKey="Castleden, Ian" sort="Castleden, Ian" uniqKey="Castleden I" first="Ian" last="Castleden">Ian Castleden</name></author><author><name sortKey="Tanz, Sandra K" sort="Tanz, Sandra K" uniqKey="Tanz S" first="Sandra K." last="Tanz">Sandra K. Tanz</name></author><author><name sortKey="Millar, A Harvey" sort="Millar, A Harvey" uniqKey="Millar A" first="A. Harvey" last="Millar">A. Harvey Millar</name></author><author><name sortKey="Heazlewood, Joshua L" sort="Heazlewood, Joshua L" uniqKey="Heazlewood J" first="Joshua L." last="Heazlewood">Joshua L. Heazlewood</name></author></analytic><series><title level="j">Plant Physiology</title><idno type="ISSN">0032-0889</idno><idno type="eISSN">1532-2548</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed to the ever-expanding array of data in modern biology, with many generating Web portals and online resources that contain incrementally expanding and updated information. Many of these resources reflect specialist research areas with significant and novel information that is not currently captured by centralized repositories. The Arabidopsis (<italic>Arabidopsis thaliana</italic>) community is well served by a number of online proteomics resources that hold an abundance of functional information. These sites can be difficult to locate among a multitude of online resources. Furthermore, they can be difficult to navigate in order to identify specific features of interest without significant technical knowledge. Recently, members of the Arabidopsis proteomics community involved in developing many of these resources decided to develop a summary aggregation portal that is capable of retrieving proteomics data from a series of online resources on the fly. The Web portal is known as the MASCP Gator and can be accessed at the following address: <ext-link ext-link-type="uri" xlink:href="http://gator.masc-proteomics.org/">http://gator.masc-proteomics.org/</ext-link>. Significantly, proteomics data displayed at this site retrieve information from the data repositories upon each request. This means that information is always up to date and displays the latest data sets. The site also provides hyperlinks back to the source information hosted at each of the curated databases to facilitate more in-depth analysis of the primary data.</p></div></front></TEI><affiliations><list></list><tree><noCountry><name sortKey="Baerenfaller, Katja" sort="Baerenfaller, Katja" uniqKey="Baerenfaller K" first="Katja" last="Baerenfaller">Katja Baerenfaller</name><name sortKey="Baginsky, Sacha" sort="Baginsky, Sacha" uniqKey="Baginsky S" first="Sacha" last="Baginsky">Sacha Baginsky</name><name sortKey="Briggs, Steven P" sort="Briggs, Steven P" uniqKey="Briggs S" first="Steven P." last="Briggs">Steven P. Briggs</name><name sortKey="Bruley, Christophe" sort="Bruley, Christophe" uniqKey="Bruley C" first="Christophe" last="Bruley">Christophe Bruley</name><name sortKey="Castleden, Ian" sort="Castleden, Ian" uniqKey="Castleden I" first="Ian" last="Castleden">Ian Castleden</name><name sortKey="Egelhofer, Volker" sort="Egelhofer, Volker" uniqKey="Egelhofer V" first="Volker" last="Egelhofer">Volker Egelhofer</name><name sortKey="Gruissem, Wilhelm" sort="Gruissem, Wilhelm" uniqKey="Gruissem W" first="Wilhelm" last="Gruissem">Wilhelm Gruissem</name><name sortKey="Heazlewood, Joshua L" sort="Heazlewood, Joshua L" uniqKey="Heazlewood J" first="Joshua L." last="Heazlewood">Joshua L. Heazlewood</name><name sortKey="Hirsch Hoffmann, Matthias" sort="Hirsch Hoffmann, Matthias" uniqKey="Hirsch Hoffmann M" first="Matthias" last="Hirsch-Hoffmann">Matthias Hirsch-Hoffmann</name><name sortKey="Jones, Alexandra M" sort="Jones, Alexandra M" uniqKey="Jones A" first="Alexandra M." last="Jones">Alexandra M. Jones</name><name sortKey="Joshi, Hiren J" sort="Joshi, Hiren J" uniqKey="Joshi H" first="Hiren J." last="Joshi">Hiren J. Joshi</name><name sortKey="Millar, A Harvey" sort="Millar, A Harvey" uniqKey="Millar A" first="A. Harvey" last="Millar">A. Harvey Millar</name><name sortKey="Nakagami, Hirofumi" sort="Nakagami, Hirofumi" uniqKey="Nakagami H" first="Hirofumi" last="Nakagami">Hirofumi Nakagami</name><name sortKey="Rolland, Norbert" sort="Rolland, Norbert" uniqKey="Rolland N" first="Norbert" last="Rolland">Norbert Rolland</name><name sortKey="Schmidt, Robert" sort="Schmidt, Robert" uniqKey="Schmidt R" first="Robert" last="Schmidt">Robert Schmidt</name><name sortKey="Schulze, Waltraud X" sort="Schulze, Waltraud X" uniqKey="Schulze W" first="Waltraud X." last="Schulze">Waltraud X. Schulze</name><name sortKey="Sun, Qi" sort="Sun, Qi" uniqKey="Sun Q" first="Qi" last="Sun">Qi Sun</name><name sortKey="Tanz, Sandra K" sort="Tanz, Sandra K" uniqKey="Tanz S" first="Sandra K." last="Tanz">Sandra K. Tanz</name><name sortKey="Toyoda, Tetsuro" sort="Toyoda, Tetsuro" uniqKey="Toyoda T" first="Tetsuro" last="Toyoda">Tetsuro Toyoda</name><name sortKey="Van Wijk, Klaas J" sort="Van Wijk, Klaas J" uniqKey="Van Wijk K" first="Klaas J." last="Van Wijk">Klaas J. Van Wijk</name><name sortKey="Weckwerth, Wolfram" sort="Weckwerth, Wolfram" uniqKey="Weckwerth W" first="Wolfram" last="Weckwerth">Wolfram Weckwerth</name><name sortKey="Wienkoop, Stefanie" sort="Wienkoop, Stefanie" uniqKey="Wienkoop S" first="Stefanie" last="Wienkoop">Stefanie Wienkoop</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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